Everything Bagel Stuffed Mini Peppers — hey, you, yes you — I am so glad you found this one. Imagine us standing in a cozy kitchen, tasting that first pepper together: bright, crunchy, and filled with that familiar everything bagel seasoning hugged by silky cream cheese and melty cheddar. These bites became my go-to when friends dropped by and when I wanted a little comfort food that still felt light and summery. With mini sweet peppers, whipped cream cheese, sharp cheddar, scallions, and a generous sprinkle of everything bagel seasoning, they are quick to assemble and impossible to resist. If you loved a similar riff on stuffed peppers before, you might also enjoy my take on Easy Cheese and Everything Bagel Stuffed Mini Peppers for more cheesy inspiration.
Bright, cheesy bites that steal the show
Why You’ll Love This Recipe
- Quick and easy to prepare for weeknights or last-minute guests
- Uses simple, pantry-friendly ingredients with fresh peppers for crunch
- Perfect for summer grazing, game day, potlucks, and holiday spreads
- Comforting and satisfying yet light enough to snack on guilt free
What makes this version special is the balance of textures and flavor bursts in every bite. I riffed on the classic cream cheese stuffed pepper by whipping the filling for extra fluff, folding in tangy Greek yogurt for brightness, and adding shredded sharp cheddar for melt and depth. Everything bagel seasoning gives a garlicky, sesame-seed crunch that ties everything together. These peppers make you feel confident in the kitchen because they are forgiving — taste as you go, swap in what you have, and still come out tasting special.
Ingredients Needed
- Mini sweet peppers, about 24 to 30 (choose a mix of red, orange, and yellow for color) — fresh and firm, not soft or blistered
- Cream cheese, 8 ounces, softened to room temperature (plain full fat or light both work)
- Plain Greek yogurt, 2 tablespoons (adds tang and lightens the filling; sub sour cream if preferred)
- Sharp cheddar cheese, 1/2 cup finely shredded (use block cheese shredded for best melt)
- Scallions, 2 to 3, thinly sliced (both white and green parts)
- Everything bagel seasoning, 2 to 3 teaspoons, plus extra for sprinkling (store-bought or homemade mix)
- Fresh lemon zest, 1/2 teaspoon (optional but brightens the filling)
- Garlic powder, 1/4 teaspoon (optional; enhances savory notes without overpowering)
- Salt and freshly ground black pepper, to taste (start light, then adjust)
- Extra-virgin olive oil, 1 teaspoon (optional for a light brush before baking)
- Fresh herbs for garnish: finely chopped dill, chives, or parsley (optional)
Substitutions and clarifications: use non-dairy cream cheese for a dairy-free version and dairy-free cheddar if needed. If peppers are very small, plan for more; if larger, fewer will be needed. Fresh everything bagel seasoning is best for texture; if unavailable, sprinkle a mix of sesame seeds, poppy seeds, dried minced garlic, dried minced onion, and coarse salt.
Need a crunchy contrast on the side? Try pairing with bite-sized toasted rolls like these savory Mini Grilled Cheese Hawaiian Rolls for a playful platter idea.
Ingredients & Equipment Notes (Optional)
- Tools that help: small mixing bowl for the filling, a rubber spatula for folding, a medium grater for cheddar, a piping bag or small spoon for filling peppers, and a rimmed baking sheet.
- Why they matter: A piping bag speeds assembly, a rimmed sheet catches any melt, and a microplane for the lemon zest gives an even, bright citrus finish. If you do not have a piping bag, use a small zip-top bag with a corner snipped off for the same effect.
Instructions – How to Make “Everything Bagel Stuffed Mini Peppers”
- Prepare the peppers. Wash the mini sweet peppers and slice each in half lengthwise. Use a small spoon or your fingers to remove any seeds and membranes. Why this matters: cleaning out the seeds ensures the filling sits snugly in the cavity and every bite is pepper-forward. Visual cue: the halves should look like tiny boats, glossy and intact.
- Soften the cream cheese. Let 8 ounces of cream cheese sit at room temperature for 20 to 30 minutes so it becomes easily spreadable. Tip: If you forgot to take it out early, microwave on low power for 10 to 12 seconds. Why: soft cream cheese whips into a fluffier filling with less effort and fewer lumps.
- Make the filling. In a medium bowl, combine the softened cream cheese and 2 tablespoons plain Greek yogurt. Beat with a spoon or small whisk until creamy and smooth. Add 1/2 cup finely shredded sharp cheddar, 2 thinly sliced scallions, 1/2 teaspoon lemon zest, 1/4 teaspoon garlic powder, 2 to 3 teaspoons everything bagel seasoning, and salt and pepper to taste. Fold gently until everything is evenly distributed. Mini tip: reserve a pinch of scallion and cheese for sprinkling on top later for a pretty finish.
- Taste and adjust. Scoop a small taste of the filling on a cracker. If it needs more tang, add a touch more Greek yogurt or lemon. If it needs more zip, a pinch more everything bagel seasoning will do it. Why this matters: this step ensures the final stuffed pepper is balanced and flavorful without being overly salty.
- Fill the peppers. Transfer the filling into a piping bag fitted with a wide tip, or use a small spoon. Pipe or spoon the filling into each pepper half, mounding slightly. Visual cue: filled pepper halves should be neat, with the filling sitting just above the pepper rim for an inviting look. Mini tip: if you want a creamier presentation, smooth the filling with the back of a spoon.
- Add toppings. Sprinkle the filled peppers with the reserved cheese and scallion, plus a pinch of everything bagel seasoning for texture. For a glossy finish before baking, lightly brush the pepper edges with a teaspoon of olive oil. Why a touch of oil helps: it encourages gentle roasting and a prettier appearance.
- Bake or serve fresh. For warm, melty bites: arrange the peppers cut-side up on a rimmed baking sheet and bake at 375 degrees F for 8 to 10 minutes until the cheese is just melted and the pepper edges begin to blister. For fresh and creamy bites: serve chilled or at room temperature without baking. Visual cues: when baked, you’ll see tiny bubbles in the cheese and slight char on the pepper edges. Mini tip: broil for 30 to 45 seconds at the end for a golden top, but watch closely.
- Garnish and present. Remove baked peppers from the oven and let cool for 2 minutes. Sprinkle with fresh herbs such as chives or dill and serve on a platter. Why cooling matters: it helps the filling set slightly so it does not drip when handled.
- Make ahead option. You can prepare the filling up to 24 hours ahead and keep it refrigerated. Fill the pepper halves shortly before serving or just before baking. Why: assembling last minute keeps pepper textures bright and avoids watery fillings. For more make-ahead appetizer ideas that pair well with these bites, I sometimes serve them alongside a light dessert like Mini Lemon Cakes with Lavender Glaze for an elegant finish.
- Final presentation. Arrange the peppers on a platter in a single layer, sprinkle an additional pinch of everything bagel seasoning for the photo-ready look, and place toothpicks nearby for easy grabbing.

Serving Suggestions & Storage Tips
Serving ideas:
- Serve warm straight from the oven for melty, comforting bites that please a crowd. Pair with crisp crudites or a light green salad.
- Serve chilled as a refreshing appetizer for summer picnics and potlucks. They are refreshing next to chilled cucumber salads or marinated olives.
- Make a grazing board: add these peppers to a cheese and charcuterie board featuring mild cheeses, crunchy crackers, grapes, and roasted nuts.
Presentation tips:
- Use a long wooden board or a bright ceramic platter to lay the peppers in rows by color for visual appeal.
- Garnish with sprigs of dill, additional scallion slices, and lemon wedges on the side for a burst of color.
- Offer small spoons of extra everything bagel seasoning and lemon wedges for guests to customize.
Pairings:
- Light white wines or sparkling non-alcoholic beverages (remember: alcohol is not used in this recipe) and iced herbal teas complement the creamy filling.
- Serve alongside small sandwiches or sliders for a fuller spread. These pair wonderfully with soft dinner rolls or mini grilled cheese sliders.
Storage:
- Refrigerator: Place leftovers in an airtight container and refrigerate for up to 3 days. If the peppers were baked, they keep well but will lose some crispness.
- Freezer: I do not recommend freezing stuffed fresh peppers because the texture of the pepper and the cream cheese can change unfavorably. If you must, freeze the filling in a sealed container for up to 2 months and fill fresh peppers after thawing.
Best reheating methods:
- To reheat baked peppers: preheat the oven to 350 degrees F and warm on a baking sheet for 6 to 8 minutes until heated through. This method restores warmth without overcooking.
- Microwave for 20 to 30 seconds for a quick reheat, but expect softer pepper texture.
- If serving cold, bring refrigerated peppers to room temperature for about 10 minutes before plating to return the creaminess.
Helpful Notes & Variations
Ingredient substitutions:
- Dairy-free: swap cream cheese and cheddar for dairy-free alternatives; use dairy-free Greek-style yogurt replacement.
- Lower fat: use light cream cheese and reduced-fat cheddar, though full-fat gives a richer mouthfeel.
- Herb twists: fold in fresh dill, finely chopped basil, or tarragon for an herb-forward version.
Dietary adaptations:
- Vegetarian: this recipe is vegetarian-friendly as written.
- Gluten-free: naturally gluten-free; double-check everything bagel seasoning for any additives.
- Keto-friendly: omit Greek yogurt or use a full-fat version and watch the quantity of sweet peppers (they are higher in natural sugars) if you follow strict macros.
Flavor add-ins:
- Finely chopped sun-dried tomatoes for umami bites.
- A teaspoon of finely chopped capers for briny tang.
- A tablespoon of minced roasted red pepper for sweetness and color contrast.
- Replace some cheddar with pepper jack for a mellow heat.
Common mistakes and how to avoid them:
- Overfilling the peppers can cause the filling to spill during baking. Fill level should be slightly mounded but not overflowing.
- Using cold cream cheese leads to clumpy filling. Soften fully or use a hand mixer for smoothness.
- Baking too long makes peppers overly soft. Watch the oven and pull them as soon as the cheese melts and the edges take on a little color.
Experience-based tips:
- For an extra crunchy top, toss a tablespoon of panko with melted butter and sprinkle on before a quick broil.
- If you like a stronger everything bagel flavor, toast the seasoning lightly in a dry skillet for 30 seconds to bloom the sesame seeds and spices before sprinkling.
- Make double the filling for last-minute refills during parties; it stores well for a day and is great on bagels or crackers.
Conclusion
Everything Bagel Stuffed Mini Peppers stand out because they bring the best parts of a bagel to a light, colorful finger food: crunchy sesame seeds, garlicky pop, and creamy cheese in every bite. They are practical for busy hosts and comforting for solo nights in, delivering both visual appeal and crowd-pleasing flavor. If you want to explore similar recipes for inspiration or alternate cheesier versions, these resources offer great variations and tips from fellow home cooks: Everything Bagel Cream Cheese Stuffed Mini Peppers, for a classic spin try Everything Cream Cheese Stuffed Mini Peppers – Wellness by Kay, and for a simple recipe walkthrough see Cream Cheese Stuffed Mini Peppers Recipe – Rose Bakes. Try the recipe, share how you jazzed it up, and pin it to your favorite boards for later.
9. Frequently Asked Questions (H2)
Can I make this recipe ahead of time?
Yes. You can prepare the filling up to 24 hours in advance and keep it refrigerated in an airtight container. Prepare the peppers by washing and halving them, but keep them separate from the filling until you are ready to assemble. Filling the peppers shortly before serving ensures they stay crisp. If you plan to bake them, assemble just before baking to preserve texture.
How should I store leftovers and how long do they last?
Store leftovers in an airtight container in the refrigerator for up to 3 days. Fresh, unbaked stuffed peppers will keep for about the same time if stored assembled, though the peppers may release some moisture. I do not recommend freezing assembled stuffed peppers because the texture of the peppers and the cream cheese changes when thawed.
What is the best way to reheat or serve this recipe after storage?
For baked peppers, reheat in a preheated oven at 350 degrees F for 6 to 8 minutes to restore warmth and texture. Microwaving for short bursts will heat them quickly but can soften the peppers further. For chilled service, take refrigerated peppers out for 10 to 15 minutes to take off the chill and bring out flavor.
Can I adjust or substitute ingredients to fit my preferences?
Absolutely. You can use non-dairy cream cheese and vegan cheddar for a dairy-free option, swap Greek yogurt for sour cream, or add different herbs and seasonings to personalize the filling. For a spicier bite, fold in diced jalapeno or use pepper jack cheese. The recipe is flexible and forgiving — taste and adjust as you go.
Do you have tips to ensure the best texture and flavor every time?
Yes. Soften cream cheese completely before mixing to avoid lumps, and taste the filling before stuffing so you can balance salt, acid, and seasoning. Use fresh mini peppers that are firm for the best crunch, and avoid over-baking to retain a pleasant bite. If serving warm, a quick broil at the end can add a golden finish, but watch carefully to prevent burning.

